Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013006.1 Corchorus olitorius cultivar O-4 contig13039, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23759

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6703--6773
35
2.0
35
91
0
115
45
1
14
39
1.53
7320--7705
193
2.0
193
98
1
756
26
21
12
38
1.90
21038--21092
6
8.7
6
86
9
74
3
1
14
80
0.94
21038--21095
26
2.2
26
87
6
82
3
1
15
79
0.95
21038--21095
19
3.0
20
82
14
68
3
1
15
79
0.95
23393--23424
10
3.3
10
95
4
57
84
0
9
6
0.78

Tables:   1

The End!