Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013010.1 Corchorus olitorius cultivar O-4 contig13043, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22121

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2256--2299
19
2.3
19
92
0
70
52
2
25
20
1.58
17677--17932
127
2.0
126
96
0
467
28
20
19
30
1.97
20478--20504
13
2.1
13
100
0
54
44
14
0
40
1.46
20625--20660
19
1.9
18
88
5
54
61
0
2
36
1.11
21369--21401
15
2.1
16
88
11
50
66
21
0
12
1.23
21898--21952
2
27.5
2
76
20
53
47
5
0
47
1.25
21897--21952
20
2.7
21
86
10
64
48
5
0
46
1.25
21898--21952
9
5.5
10
76
20
53
47
5
0
47
1.25
22072--22120
11
4.4
11
75
14
55
36
0
2
61
1.08

Tables:   1

The End!