Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013012.1 Corchorus olitorius cultivar O-4 contig13045, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18467

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--411
41
7.8
43
82
10
376
42
26
10
21
1.84
84--410
84
3.9
84
90
6
511
42
26
10
21
1.84
520--560
2
20.5
2
89
0
64
48
4
0
46
1.23
2989--3031
20
2.1
21
83
8
54
46
2
0
51
1.13
3857--3898
19
2.3
18
84
8
57
35
2
0
61
1.09
11498--11540
18
2.4
18
96
0
77
6
9
18
65
1.44
13041--13072
12
2.7
12
100
0
64
15
6
25
53
1.65

Tables:   1

The End!