Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013014.1 Corchorus olitorius cultivar O-4 contig13047, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33376

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11414--11477
24
2.7
24
77
13
69
42
25
9
23
1.84
12503--13448
439
2.2
437
91
1
1511
42
18
12
26
1.86
17325--17406
23
3.5
22
68
15
58
13
37
28
20
1.90
17795--17856
16
3.9
16
91
0
88
41
41
3
12
1.59
19882--20006
36
3.5
36
88
0
160
18
30
24
26
1.98
20266--20302
1
37.0
1
100
0
74
100
0
0
0
0.00
24198--24234
11
3.4
11
88
11
58
75
0
0
24
0.80
30378--30407
12
2.4
13
88
11
53
13
6
13
66
1.43

Tables:   1

The End!