Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013018.1 Corchorus olitorius cultivar O-4 contig13051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23283

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
897--926
15
2.0
15
93
0
51
70
0
26
3
1.03
1533--1580
24
2.0
25
91
4
80
35
4
8
52
1.51
7697--7746
25
2.0
25
96
0
91
36
18
32
14
1.90
8604--8652
25
2.0
25
100
0
98
34
20
32
12
1.90
10122--10173
13
3.6
14
84
10
61
36
5
17
40
1.73
10470--10712
131
1.9
123
90
6
387
37
11
2
48
1.50
17421--17830
204
2.0
201
94
2
723
43
8
10
36
1.70
17902--17948
25
1.9
24
91
4
76
53
8
8
29
1.61
17940--18019
39
2.0
40
92
2
135
36
3
8
51
1.51
20942--20998
12
4.7
13
77
12
59
52
7
1
38
1.39

Tables:   1

The End!