Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013022.1 Corchorus olitorius cultivar O-4 contig13055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63712

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18453--18488
18
2.0
18
88
0
54
47
5
11
36
1.63
19405--19440
19
1.9
18
88
5
54
41
2
22
33
1.68
21467--21544
34
2.3
34
91
4
131
30
12
25
30
1.93
27277--27323
21
2.2
22
92
3
78
68
4
19
8
1.33
27498--27590
40
2.4
39
75
7
98
41
12
9
35
1.76
28804--29094
53
5.5
53
78
8
247
27
16
20
36
1.94
28902--29094
107
1.8
107
85
2
271
26
16
18
38
1.92
29000--29123
53
2.3
54
80
5
126
26
15
18
39
1.90
28902--29146
107
2.3
106
79
6
251
26
14
19
39
1.90
28679--29576
215
4.2
215
76
9
685
27
18
21
33
1.96
28675--29781
54
20.9
53
77
8
777
27
17
21
33
1.96
29561--29645
42
2.0
42
90
0
134
28
17
23
30
1.97
29456--29756
150
2.0
149
87
3
426
26
17
23
31
1.97
29402--29781
204
1.9
203
83
4
498
26
16
23
33
1.96
31020--31098
38
2.1
38
97
0
149
25
17
27
29
1.98
44435--44502
4
17.0
4
84
0
64
50
11
0
38
1.39
44435--44498
6
10.7
6
83
12
69
50
12
0
37
1.41
44435--44502
10
6.8
10
82
0
64
50
11
0
38
1.39
55695--55745
21
2.4
22
80
3
59
70
5
7
15
1.30
55702--55750
21
2.4
21
77
16
57
67
6
8
18
1.37
60117--60143
13
2.1
13
100
0
54
22
22
22
33
1.97

Tables:   1

The End!