Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013024.1 Corchorus olitorius cultivar O-4 contig13057, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38588

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6990--7506
110
4.7
110
87
1
667
41
13
11
33
1.80
6990--7506
223
2.3
219
86
3
687
41
13
11
33
1.80
11827--11936
41
2.7
41
100
0
220
28
27
2
41
1.69
16282--16328
14
3.4
14
71
11
51
57
14
4
23
1.55
20325--20349
6
4.2
6
100
0
50
16
16
0
68
1.22
20702--20760
21
3.0
20
82
7
75
30
16
11
40
1.85
30557--30636
29
2.7
30
81
13
94
42
11
26
20
1.85
36412--36584
57
3.0
57
97
0
328
32
26
2
39
1.69

Tables:   1

The End!