Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013028.1 Corchorus olitorius cultivar O-4 contig13061, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36413

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
963--1017
21
2.6
21
91
0
83
16
47
21
14
1.82
1372--1401
15
2.1
14
93
6
51
13
16
6
63
1.50
4247--4288
15
2.7
15
96
3
75
11
7
14
66
1.43
9856--9923
33
2.1
33
94
0
118
42
5
17
33
1.74
10155--10193
18
2.2
18
100
0
78
30
5
15
48
1.66
14523--14562
15
2.6
16
88
4
55
15
10
12
62
1.54
24973--25061
43
2.1
43
93
0
151
19
22
14
43
1.87
36159--36195
17
2.3
17
86
9
51
8
13
2
75
1.13

Tables:   1

The End!