Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013034.1 Corchorus olitorius cultivar O-4 contig13067, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11843

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
765--1211
22
20.1
22
71
13
121
34
11
18
35
1.87
739--864
44
2.8
44
84
3
146
41
14
12
31
1.83
1095--1238
66
2.2
65
79
6
157
32
12
15
38
1.85
995--1214
44
5.0
43
71
14
155
31
10
18
39
1.85
1004--1238
44
5.3
42
69
13
118
31
11
17
40
1.84
1117--1238
22
5.6
21
77
13
104
31
11
17
40
1.85
2983--3087
44
2.5
42
82
3
129
37
11
15
36
1.83
2986--3142
66
2.4
65
81
10
158
40
11
13
35
1.81
2982--3143
22
7.4
22
69
12
109
40
11
14
34
1.81
3314--3550
22
10.6
22
75
6
163
30
12
18
38
1.88
5015--5054
19
2.1
19
100
0
80
40
17
0
42
1.49

Tables:   1

The End!