Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013037.1 Corchorus olitorius cultivar O-4 contig13070, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2486

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
232--279
17
2.8
16
78
12
51
4
25
52
18
1.63
234--278
23
2.0
23
95
0
81
4
26
48
20
1.68
232--281
6
8.7
6
82
8
59
4
26
50
20
1.66
285--327
16
2.7
16
81
0
59
9
16
39
34
1.80
222--343
23
5.3
22
68
12
66
5
22
45
26
1.75
455--508
27
2.0
27
92
3
92
35
14
0
50
1.44
1350--1423
34
2.1
36
87
5
107
18
40
37
2
1.65
1523--1557
6
6.2
6
93
6
56
82
0
0
17
0.66
1523--1557
16
2.1
17
94
5
63
82
0
0
17
0.66

Tables:   1

The End!