Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013041.1 Corchorus olitorius cultivar O-4 contig13074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20386

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
360--509
79
1.9
79
97
0
282
30
20
14
35
1.91
582--700
50
2.4
50
97
0
220
30
30
13
26
1.94
728--933
50
4.1
50
97
0
385
32
12
28
27
1.92
1213--1300
27
3.3
27
76
9
99
17
15
27
39
1.90
1559--1648
36
2.5
36
98
0
171
34
12
13
40
1.82
8965--8989
3
8.3
3
100
0
50
32
0
0
68
0.90
11314--11358
21
2.1
21
88
8
65
40
0
26
33
1.57

Tables:   1

The End!