Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013046.1 Corchorus olitorius cultivar O-4 contig13079, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4336

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
356--397
21
2.0
21
100
0
84
23
38
19
19
1.93
304--469
71
2.3
72
88
4
246
30
26
22
20
1.98
427--469
22
2.0
22
85
0
59
20
32
23
23
1.98
1028--1161
21
6.4
21
87
8
175
29
17
25
26
1.98
1028--1161
63
2.1
63
87
8
193
29
17
25
26
1.98
2020--2066
26
1.9
24
87
12
69
27
27
4
40
1.75
3389--3430
21
2.0
21
95
0
75
33
26
19
21
1.97

Tables:   1

The End!