Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013048.1 Corchorus olitorius cultivar O-4 contig13081, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6861

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
854--895
15
2.7
15
92
3
66
11
9
14
64
1.50
4729--4958
27
8.0
27
68
18
85
64
0
6
27
1.25
4726--5021
46
6.6
45
83
8
365
63
0
8
27
1.27
4736--5021
88
3.2
88
90
3
423
63
0
8
27
1.28
4677--4834
8
20.1
8
67
13
51
63
1
9
25
1.35
4810--5021
19
11.8
18
67
18
70
62
0
9
27
1.30
4871--5006
27
5.4
27
73
18
80
62
0
9
27
1.26
6326--6687
35
10.0
35
82
8
404
41
20
13
25
1.88
6345--6429
44
2.0
43
88
2
125
51
15
10
22
1.73
6652--6811
54
3.0
54
92
0
266
31
25
18
25
1.97

Tables:   1

The End!