Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013049.1 Corchorus olitorius cultivar O-4 contig13082, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9894

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--832
154
5.4
154
88
1
1193
22
19
18
40
1.92
731--936
104
2.0
102
82
7
247
26
16
17
38
1.92
833--3661
153
18.5
153
88
2
4126
21
19
18
40
1.92
833--3661
307
9.2
307
88
2
4121
21
19
18
40
1.92
833--3661
460
6.2
459
88
3
4068
21
19
18
40
1.92
4115--4361
4
62.8
4
64
16
97
63
0
8
27
1.26
4094--4252
27
6.4
26
73
19
99
64
0
8
26
1.25
4048--4355
44
6.9
44
85
8
349
64
0
9
25
1.29
4130--4341
19
11.3
19
71
20
117
63
0
8
27
1.28
5873--6228
35
10.0
35
85
5
455
40
20
13
25
1.89
6193--6406
54
4.0
54
93
0
374
30
24
17
26
1.97

Tables:   1

The End!