Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013051.1 Corchorus olitorius cultivar O-4 contig13084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16951

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7707--7748
5
7.8
5
89
10
57
0
2
21
76
0.90
9230--9284
3
18.7
3
82
17
71
1
1
27
69
1.09
12339--12383
18
2.6
17
80
16
56
0
0
24
75
0.80
13269--13304
19
1.9
18
88
5
54
41
8
22
27
1.82
13258--13316
30
2.0
30
83
6
75
42
8
18
30
1.80
15924--15999
2
43.0
2
71
23
64
48
0
0
51
1.00
15924--16000
35
2.2
35
95
4
138
49
0
0
50
1.00

Tables:   1

The End!