Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013052.1 Corchorus olitorius cultivar O-4 contig13085, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40850

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
77--150
7
10.0
7
74
18
53
45
1
1
51
1.18
77--151
9
8.4
9
74
14
59
46
1
1
50
1.18
18786--18860
4
20.0
4
80
10
63
0
28
0
72
0.86
18797--18870
12
6.1
13
72
21
63
0
24
0
75
0.80
18799--18873
16
4.7
17
71
26
58
0
22
0
77
0.77
18793--18881
19
4.3
20
75
20
78
0
23
0
76
0.79
26701--26726
2
13.0
2
100
0
52
50
0
0
50
1.00
29167--29205
2
19.5
2
100
0
78
48
0
0
51
1.00

Tables:   1

The End!