Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013057.1 Corchorus olitorius cultivar O-4 contig13090, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45455

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--59
14
3.5
12
84
9
54
33
0
8
57
1.30
2654--2717
3
21.7
3
96
3
121
34
0
0
65
0.93
4080--4104
12
2.1
12
100
0
50
60
0
0
40
0.97
6958--7840
291
3.0
292
88
5
1305
24
16
16
43
1.87
7916--8006
45
2.1
42
88
8
130
34
3
20
41
1.69
8624--8904
151
1.9
151
89
1
438
51
4
7
35
1.51
13189--13226
20
1.9
20
84
10
51
23
7
5
63
1.42
29201--29257
1
57.0
1
92
0
87
1
1
1
94
0.38
29190--29254
30
2.2
30
91
5
105
1
3
4
90
0.58
29331--29396
29
2.3
29
89
2
98
27
10
16
45
1.80
37680--37738
30
2.0
30
93
0
100
32
13
20
33
1.91
37868--37991
60
2.1
60
93
0
212
29
12
27
30
1.92
40736--40800
24
2.7
24
92
0
103
38
41
6
13
1.70

Tables:   1

The End!