Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013059.1 Corchorus olitorius cultivar O-4 contig13092, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37923

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2268--2303
18
1.9
19
88
5
56
47
2
13
36
1.58
2747--2797
21
2.4
21
100
0
102
19
23
15
41
1.90
6132--6180
21
2.3
21
100
0
98
20
24
14
40
1.89
8795--8837
22
2.0
22
81
9
52
16
9
11
62
1.53
13735--13963
114
2.0
114
100
0
458
23
33
8
34
1.86
27851--27885
16
2.2
16
89
0
52
37
14
14
34
1.86
33303--33335
2
16.5
2
100
0
66
48
0
0
51
1.00
35199--35301
22
4.6
21
73
19
66
33
7
15
43
1.75
37237--37303
35
1.9
35
84
0
89
25
0
32
41
1.56

Tables:   1

The End!