Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013060.1 Corchorus olitorius cultivar O-4 contig13093, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20267

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--341
40
8.5
40
91
2
549
19
29
20
29
1.97
4440--4481
21
2.0
21
90
0
66
38
26
16
19
1.92
8492--8521
11
2.7
11
89
0
51
46
6
40
6
1.56
8899--8940
21
2.0
21
100
0
84
33
28
19
19
1.96
12315--12431
35
3.3
35
86
4
157
41
17
15
25
1.89
16119--16154
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!