Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013065.1 Corchorus olitorius cultivar O-4 contig13098, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21484

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--137
2
69.5
2
97
2
260
0
48
0
51
1.00
1852--1883
2
16.0
2
100
0
64
50
0
0
50
1.00
6993--7017
12
2.1
12
100
0
50
36
8
0
56
1.29
7446--7482
10
3.7
10
88
0
56
48
35
16
0
1.46
7613--7678
34
1.9
34
84
6
89
39
3
13
43
1.60
8214--8253
21
1.9
21
89
0
62
37
5
22
35
1.76
9881--9924
23
1.9
23
86
9
63
9
11
2
77
1.08

Tables:   1

The End!