Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013076.1 Corchorus olitorius cultivar O-4 contig13109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2646

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
327--420
43
2.2
42
86
5
136
50
17
12
20
1.78
710--851
70
2.0
70
82
8
173
31
18
24
25
1.97
772--1234
128
3.6
128
92
1
732
34
18
21
25
1.96
1156--1304
70
2.1
69
84
6
185
33
18
25
22
1.96
1238--1510
102
2.7
102
97
0
519
31
16
26
26
1.96
1312--1472
53
3.1
53
63
22
142
31
15
26
27
1.96
1446--1578
68
1.9
69
98
1
259
30
18
25
25
1.98
1344--1696
170
2.1
171
97
1
672
32
15
25
26
1.96
1165--1680
272
1.9
274
92
2
869
31
16
25
26
1.96

Tables:   1

The End!