Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013080.1 Corchorus olitorius cultivar O-4 contig13113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22883

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4480--4638
28
5.5
29
78
7
162
42
25
15
16
1.88
4480--4637
59
2.7
56
79
5
172
42
25
14
17
1.87
6574--6602
9
3.3
9
95
4
51
34
20
0
44
1.52
7864--8062
45
4.4
45
94
0
317
24
43
2
30
1.67
8271--8299
15
1.9
15
100
0
58
27
13
24
34
1.93
9807--9849
20
2.2
20
86
0
59
20
32
13
32
1.92
16051--16078
14
2.0
14
100
0
56
28
14
7
50
1.69
19581--19697
34
3.6
33
76
17
129
35
17
13
33
1.90
19520--19730
63
3.3
62
87
7
284
35
16
15
32
1.91

Tables:   1

The End!