Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013083.1 Corchorus olitorius cultivar O-4 contig13116, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20246

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47--81
2
17.5
2
93
0
61
48
0
0
51
1.00
1524--1554
16
2.0
16
93
6
55
67
0
0
32
0.91
7849--7911
31
2.1
31
91
5
103
38
15
22
23
1.93
9215--9279
24
2.6
25
85
2
87
10
3
20
66
1.36
13312--13413
51
2.0
50
80
12
111
21
21
14
42
1.89
13949--14028
40
2.0
40
90
0
124
45
3
15
36
1.64
16232--16330
22
4.5
22
93
0
171
24
21
14
40
1.90

Tables:   1

The End!