Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013086.1 Corchorus olitorius cultivar O-4 contig13119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22651

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--89
2
45.0
2
97
2
171
0
49
0
50
1.00
2606--2841
117
2.0
118
96
0
438
30
20
16
32
1.95
5478--5505
10
2.8
10
100
0
56
42
0
50
7
1.30
6675--6744
6
11.8
6
77
19
58
0
5
17
77
0.96
6694--6740
5
8.8
5
86
13
67
0
4
17
78
0.90
6693--6744
11
4.7
11
95
0
86
0
3
17
78
0.89
9793--9854
30
2.1
30
90
0
97
25
22
6
45
1.76
13460--15630
154
14.1
154
93
0
3639
20
19
18
41
1.91
13460--15630
461
4.7
461
92
1
3614
20
19
18
41
1.91
16609--16637
9
3.2
9
100
0
58
20
44
0
34
1.52

Tables:   1

The End!