Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013096.1 Corchorus olitorius cultivar O-4 contig13129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25212

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
484--522
19
2.1
18
85
4
51
51
2
10
35
1.50
4870--4914
22
2.0
22
100
0
90
26
28
17
26
1.98
5905--5983
32
2.5
33
85
8
101
44
3
8
43
1.53
7274--7334
3
20.3
3
100
0
122
32
0
0
67
0.91
7890--8144
122
2.0
124
87
7
361
37
10
1
49
1.49
8130--8168
14
2.9
13
80
3
51
41
2
2
53
1.28
13527--13594
22
3.0
22
77
14
68
38
1
1
58
1.16
22963--23052
33
2.8
33
81
1
110
32
17
24
25
1.97

Tables:   1

The End!