Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013098.1 Corchorus olitorius cultivar O-4 contig13131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14600

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2859--2919
23
2.7
22
87
10
79
65
16
0
18
1.27
2858--2919
6
10.7
6
74
22
53
66
16
0
17
1.26
3517--3666
50
3.0
50
89
3
230
33
16
13
36
1.88
4307--4655
50
6.9
50
91
1
482
30
27
12
28
1.93
4951--5024
27
2.7
27
82
0
76
20
12
25
41
1.87
5142--5180
18
2.2
18
100
0
78
10
23
15
51
1.73
13244--13887
68
9.7
68
82
7
646
22
18
15
43
1.88
13591--13717
61
2.1
60
82
5
148
19
20
17
42
1.89

Tables:   1

The End!