Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013107.1 Corchorus olitorius cultivar O-4 contig13140, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41245

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
711--762
26
2.0
25
81
3
59
57
5
5
30
1.46
1398--1468
37
1.9
37
97
0
133
36
15
8
39
1.78
12965--13016
25
2.1
24
89
3
77
26
26
21
25
1.99
16587--16673
45
2.0
44
88
6
133
36
21
6
34
1.81
20317--20342
2
13.0
2
100
0
52
50
0
0
50
1.00
27011--27441
216
2.0
216
98
0
835
29
20
16
32
1.95
29649--29768
60
2.0
60
95
0
213
25
19
15
40
1.91
31146--31207
30
2.1
30
93
0
106
46
4
22
25
1.71
32566--32606
14
2.9
14
85
10
57
14
12
26
46
1.80
32581--32643
32
2.0
32
96
0
117
17
14
25
42
1.87

Tables:   1

The End!