Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013108.1 Corchorus olitorius cultivar O-4 contig13141, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18036

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5285--5442
77
2.0
78
83
6
196
24
27
18
29
1.98
5836--5891
25
2.2
26
83
3
69
60
5
5
28
1.41
9636--9672
18
2.1
18
94
0
65
27
16
24
32
1.96
10895--10919
2
12.5
2
100
0
50
48
0
0
52
1.00
10998--11221
115
1.9
116
89
2
344
38
21
9
29
1.85
11829--11871
22
1.9
22
85
4
59
53
0
11
34
1.37
12177--12218
22
1.9
22
85
0
57
59
4
30
4
1.39

Tables:   1

The End!