Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013109.1 Corchorus olitorius cultivar O-4 contig13142, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13879

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--38
2
17.0
2
100
0
68
0
50
0
50
1.00
3211--3256
3
15.0
3
90
4
74
30
2
0
67
1.03
8517--8821
151
2.0
150
99
0
601
29
11
24
35
1.90
12614--12678
33
1.9
34
93
3
114
12
16
23
47
1.80
12909--12954
2
22.0
2
86
8
65
45
6
0
47
1.28
13007--13214
103
2.0
103
96
0
380
41
5
8
44
1.58
13346--13392
25
1.9
24
91
4
76
29
8
6
55
1.55
13466--13873
201
2.0
202
96
0
746
36
11
8
44
1.69

Tables:   1

The End!