Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013111.1 Corchorus olitorius cultivar O-4 contig13144, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24610

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
262--294
13
2.5
13
95
0
57
45
9
0
45
1.35
1393--1470
30
2.5
31
95
4
149
20
7
17
53
1.68
4909--4935
12
2.2
12
100
0
54
74
0
18
7
1.05
4925--4966
14
3.1
13
83
16
50
83
0
16
0
0.65
6412--6441
3
10.0
3
100
0
60
66
0
0
33
0.92
18569--18677
53
2.1
53
98
0
209
44
14
21
19
1.86
20370--20453
42
2.0
42
95
0
150
33
21
20
25
1.97

Tables:   1

The End!