Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013116.1 Corchorus olitorius cultivar O-4 contig13149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40730

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15178--15257
40
2.0
40
97
0
151
46
12
17
23
1.82
17066--17163
48
2.0
48
98
0
187
35
16
8
39
1.78
17115--17256
70
2.0
70
97
0
266
30
18
7
43
1.78
17404--17510
54
2.0
54
98
0
205
43
18
6
30
1.75
35622--35655
12
2.8
12
81
0
50
35
0
0
64
0.94
36081--36135
21
2.5
22
97
2
103
34
3
25
36
1.74
38212--38307
45
2.2
44
85
7
126
37
18
7
36
1.79
39560--39611
22
2.2
24
80
16
65
55
1
1
40
1.22

Tables:   1

The End!