Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013121.1 Corchorus olitorius cultivar O-4 contig13154, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2695

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28--175
48
3.0
48
87
2
215
33
16
12
37
1.86
22--177
50
3.2
50
86
4
219
33
16
12
38
1.85
845--1319
50
9.5
50
92
1
736
32
27
12
28
1.92
845--1319
251
1.9
250
91
2
783
32
27
12
28
1.92
1598--1700
27
3.7
27
78
11
93
20
17
26
35
1.94
1824--1875
21
2.7
20
82
11
63
23
17
7
51
1.70

Tables:   1

The End!