Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013123.1 Corchorus olitorius cultivar O-4 contig13156, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19365

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1550--1601
19
2.6
19
69
6
50
59
21
13
5
1.55
7289--7328
18
2.2
18
100
0
80
47
17
5
30
1.69
11575--11606
15
2.1
15
94
0
55
25
28
21
25
1.99
12552--12594
7
5.9
7
78
10
50
81
0
2
16
0.79
12549--12594
16
3.0
16
81
18
62
78
0
2
19
0.86
18658--18771
58
2.0
57
87
1
165
33
21
14
31
1.92

Tables:   1

The End!