Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013126.1 Corchorus olitorius cultivar O-4 contig13159, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24351

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
236--261
11
2.4
11
100
0
52
7
15
7
69
1.35
1016--1056
15
2.7
15
88
3
55
14
9
14
60
1.57
4699--4753
21
2.6
21
82
5
67
16
47
21
14
1.82
8605--8646
15
2.7
15
92
3
66
11
9
14
64
1.50
10561--10614
28
2.0
28
85
7
76
12
7
27
51
1.66
14599--14675
24
3.1
24
71
12
75
19
19
27
33
1.96
15614--15708
42
2.3
41
78
5
100
31
17
28
22
1.97
15891--16191
27
11.0
27
73
12
186
21
29
26
22
1.99
16038--16187
81
1.9
81
85
2
212
18
30
28
22
1.98
16202--16282
27
3.0
26
75
12
65
23
27
25
23
2.00

Tables:   1

The End!