Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013127.1 Corchorus olitorius cultivar O-4 contig13160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10352

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
199--266
33
2.1
33
97
0
127
30
20
23
25
1.98
1752--1797
23
2.0
24
83
12
60
52
6
4
36
1.47
5480--5521
15
2.7
15
96
3
75
11
7
14
66
1.43
5854--5912
31
2.0
29
86
6
82
33
8
15
42
1.77
5961--6035
23
3.3
21
80
12
60
41
9
12
37
1.74
5972--6037
24
2.9
23
84
6
89
43
7
12
36
1.70
6070--6119
24
2.0
24
88
11
75
48
12
8
32
1.69

Tables:   1

The End!