Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013133.1 Corchorus olitorius cultivar O-4 contig13166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31414

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4798--5039
121
2.0
121
93
0
412
27
15
16
40
1.89
5540--5796
130
2.0
130
97
0
487
30
15
21
33
1.94
8326--8386
30
2.1
30
84
9
81
49
4
3
42
1.40
8378--8416
20
2.0
20
85
5
53
43
5
7
43
1.55
9683--9719
16
2.4
15
90
4
56
45
2
2
48
1.30
11133--11209
38
2.0
38
97
0
145
33
32
16
16
1.92
26639--26740
51
2.0
52
81
9
120
22
23
13
40
1.90
28528--28575
11
4.7
11
80
12
50
39
10
20
29
1.86

Tables:   1

The End!