Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013135.1 Corchorus olitorius cultivar O-4 contig13168, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23714

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1079--1219
33
4.3
31
79
9
120
26
7
22
43
1.80
2972--3063
21
4.4
21
93
2
150
28
17
27
27
1.98
4102--4622
35
14.9
35
80
2
537
18
19
19
42
1.89
4102--4622
105
5.0
105
83
3
622
18
19
19
42
1.89
10700--10735
16
2.2
16
95
5
63
13
5
11
69
1.34
17016--17051
16
2.2
16
95
5
63
13
5
11
69
1.34
20288--20317
15
1.9
16
93
6
53
20
6
6
66
1.38

Tables:   1

The End!