Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013138.1 Corchorus olitorius cultivar O-4 contig13171, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3629

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
253--277
13
1.9
13
100
0
50
32
16
8
44
1.76
984--1027
17
2.6
18
85
10
65
0
29
0
70
0.88
984--1033
16
3.0
17
88
8
68
0
30
0
70
0.88
1000--1056
29
1.9
28
82
10
69
1
28
0
70
0.98
976--1064
20
4.4
20
74
14
76
2
28
0
69
1.00
1023--1054
14
2.3
14
94
0
55
3
28
0
68
1.04
1124--1199
22
3.7
22
66
28
67
13
38
40
7
1.73
1128--1214
39
2.2
39
100
0
174
13
39
39
8
1.75

Tables:   1

The End!