Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013139.1 Corchorus olitorius cultivar O-4 contig13172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7275

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1015--1071
27
2.1
27
100
0
114
40
10
17
31
1.84
1559--1829
35
7.8
35
95
3
449
26
21
21
30
1.98
1847--2351
105
4.8
105
91
0
769
28
16
28
27
1.97
1847--2351
211
2.4
209
90
1
776
28
16
28
27
1.97
3101--3195
49
1.9
49
87
4
138
35
15
15
32
1.90
3164--3230
33
2.0
33
97
0
125
28
11
19
40
1.87
3894--3925
12
2.7
12
100
0
64
28
12
18
40
1.87

Tables:   1

The End!