Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013140.1 Corchorus olitorius cultivar O-4 contig13173, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30313

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
598--649
24
2.2
23
82
3
59
69
21
3
5
1.26
2149--2191
19
2.3
19
84
8
52
76
11
11
0
1.02
10239--10286
24
2.0
24
87
0
69
20
14
6
58
1.58
14610--14660
13
3.8
13
75
10
57
41
5
25
27
1.78
16628--16659
13
2.5
13
100
0
64
59
6
0
34
1.23
16994--17063
28
2.4
29
97
2
133
44
11
14
30
1.80
24249--24307
29
2.0
30
90
3
93
37
18
6
37
1.78
25383--25441
30
2.0
29
83
3
73
37
8
16
37
1.80
29673--29725
25
2.1
25
96
0
97
33
9
7
49
1.64
29940--30096
79
2.0
78
91
1
251
8
42
15
33
1.77

Tables:   1

The End!