Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013154.1 Corchorus olitorius cultivar O-4 contig13187, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16108

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
515--540
6
4.3
6
100
0
52
0
30
30
38
1.58
6323--6416
45
2.2
44
86
7
140
38
20
5
36
1.75
9136--9208
37
2.0
37
91
2
121
28
6
10
53
1.61
10965--11010
22
2.0
23
84
12
60
58
13
2
26
1.46
12820--13016
98
2.0
98
100
0
394
32
11
22
33
1.90
14640--14677
18
2.2
18
90
4
60
47
0
21
31
1.51
15615--15652
18
2.1
18
95
0
67
28
34
13
23
1.92
15977--16082
48
2.2
49
86
5
153
22
17
4
54
1.61

Tables:   1

The End!