Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013159.1 Corchorus olitorius cultivar O-4 contig13192, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16543

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3230--3277
21
2.4
20
89
6
71
16
29
10
43
1.81
4028--4059
3
10.7
3
100
0
64
34
0
65
0
0.93
4251--4294
21
2.1
21
100
0
88
13
36
13
36
1.85
5412--5455
21
2.1
21
95
0
79
11
36
15
36
1.84
6340--6381
21
2.0
21
86
9
59
26
9
59
4
1.48
6507--6551
4
11.2
4
80
0
54
26
0
2
71
0.98
6506--6559
12
4.5
12
78
0
54
29
1
1
66
1.12
6507--6549
16
2.7
16
92
0
68
25
0
2
72
0.97
6714--6744
13
2.3
14
88
11
55
19
6
0
74
1.03
6832--6871
18
2.2
18
91
8
64
30
37
7
25
1.83
8066--8117
26
2.0
26
96
0
95
42
17
11
28
1.84
16285--16421
60
2.3
60
87
0
184
14
21
32
30
1.94

Tables:   1

The End!