Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013163.1 Corchorus olitorius cultivar O-4 contig13196, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29209

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8243--8287
21
2.0
23
87
8
67
28
0
0
71
0.87
9028--9072
19
2.2
20
88
11
65
35
13
31
20
1.91
13257--13290
16
2.1
16
88
0
50
47
8
2
41
1.50
18686--18825
49
2.9
48
81
8
153
27
16
5
50
1.65
19642--19704
15
4.2
15
95
0
108
46
15
22
15
1.84
22003--22039
2
18.5
2
100
0
74
48
0
0
51
1.00
27057--27361
40
7.9
39
81
12
319
36
16
16
31
1.91
27056--27361
76
4.0
75
79
12
284
36
16
16
31
1.91
27348--27394
26
1.9
25
87
12
71
40
8
14
36
1.77

Tables:   1

The End!