Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013169.1 Corchorus olitorius cultivar O-4 contig13202, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15557

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1316--1465
76
2.0
76
80
7
171
18
28
28
26
1.98
2383--2422
15
2.6
16
88
4
55
62
12
10
15
1.54
6048--6092
2
23.0
2
88
4
65
46
0
4
48
1.22
10432--10478
23
2.0
23
100
0
94
21
19
21
38
1.94
10705--10808
52
2.0
52
100
0
208
26
19
19
34
1.95
10804--10871
29
2.3
29
85
7
84
32
20
10
36
1.86
10987--11042
29
1.9
29
88
0
85
33
10
19
35
1.87
12334--12373
8
5.0
8
84
0
53
7
17
0
75
1.03

Tables:   1

The End!