Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013170.1 Corchorus olitorius cultivar O-4 contig13203, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11145

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1180
30
39.1
30
85
3
1420
46
19
14
20
1.84
1446--1621
69
2.6
69
93
0
307
28
14
29
26
1.95
1785--1838
26
2.1
26
89
6
83
44
18
20
16
1.87
1875--2254
35
11.0
35
78
6
355
40
18
22
19
1.92
1875--2252
104
3.7
103
79
7
390
39
18
22
19
1.92
3147--3200
7
7.7
7
82
13
67
0
0
12
87
0.56
3148--3201
6
9.0
6
88
8
67
0
0
14
85
0.61
3145--3197
5
10.8
5
84
15
51
0
0
13
86
0.56
3144--3187
23
2.0
23
86
8
65
2
0
13
84
0.73
3809--3845
19
2.0
19
89
5
58
29
8
5
56
1.51
4268--4313
2
23.5
2
86
4
58
50
6
0
43
1.28
7615--7654
20
1.9
22
85
10
57
50
12
17
20
1.78

Tables:   1

The End!