Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013174.1 Corchorus olitorius cultivar O-4 contig13207, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47350

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
638--731
45
2.2
42
86
7
136
35
6
21
37
1.79
2222--2308
45
2.0
44
88
2
129
39
21
3
35
1.71
4614--5008
204
1.9
203
89
2
614
28
18
18
33
1.95
11472--11567
37
2.6
37
86
1
129
25
18
41
14
1.88
12724--12759
18
1.9
19
94
5
65
5
16
27
50
1.68
24243--24273
15
2.1
15
93
0
53
32
9
25
32
1.88
45596--46412
44
19.0
43
67
14
246
35
17
8
39
1.80
45439--45876
22
20.0
22
72
8
259
36
16
9
37
1.82
45642--45721
23
3.5
23
86
6
110
38
17
6
37
1.75
45966--46406
22
19.9
22
70
10
159
35
16
9
38
1.81
46430--46644
22
9.8
22
67
15
106
38
18
9
33
1.84
46438--46644
64
3.1
66
76
12
192
38
19
9
32
1.83
47019--47046
13
2.2
13
100
0
56
46
0
14
39
1.44

Tables:   1

The End!