Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013176.1 Corchorus olitorius cultivar O-4 contig13209, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30337

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1322--1374
21
2.5
21
87
0
70
15
22
50
11
1.75
4320--4364
20
2.2
20
88
7
65
64
13
6
15
1.47
4696--4727
15
2.2
14
94
5
55
59
9
12
18
1.59
5503--5528
11
2.4
11
100
0
52
69
7
15
7
1.35
7317--7354
5
7.8
5
82
5
51
73
26
0
0
0.83
7872--8433
41
13.8
40
80
8
557
36
22
25
16
1.94
8402--8633
51
4.5
51
87
2
306
36
21
24
18
1.95
13824--13998
86
2.0
86
98
0
341
29
10
6
53
1.62
29668--29696
14
2.1
14
100
0
58
6
6
34
51
1.55

Tables:   1

The End!