Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013190.1 Corchorus olitorius cultivar O-4 contig13223, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23319

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
547--749
101
2.0
101
100
0
406
38
11
15
34
1.84
5628--5707
27
3.0
26
81
7
79
15
16
25
43
1.86
5657--5723
27
2.5
27
80
0
71
13
14
29
41
1.85
5882--5919
20
1.9
20
88
0
58
10
21
23
44
1.83
6963--7035
27
2.7
27
87
6
87
19
20
23
36
1.95
8169--8243
28
2.7
28
93
2
134
18
13
22
45
1.84
8339--8421
37
2.2
38
89
2
123
22
9
14
53
1.70
10773--10903
41
3.2
40
82
7
133
20
14
17
47
1.83
10825--10914
41
2.2
40
86
7
119
22
14
17
45
1.85
15002--15039
16
2.3
17
86
4
51
76
0
18
5
0.97

Tables:   1

The End!