Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013191.1 Corchorus olitorius cultivar O-4 contig13224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32739

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10200--10224
12
2.1
12
100
0
50
32
52
0
16
1.44
12187--12231
19
2.4
18
81
3
54
51
2
4
42
1.34
20194--20232
15
2.5
15
91
4
60
64
12
10
12
1.51
20976--21001
11
2.4
11
100
0
52
69
7
15
7
1.35
25824--25862
3
13.3
3
94
5
71
66
0
0
33
0.92
26395--26421
13
2.1
13
100
0
54
66
7
0
25
1.17
29993--30025
6
5.5
6
100
0
66
36
33
0
30
1.58
30686--30717
15
2.1
15
100
0
64
34
0
25
40
1.56
31930--31962
14
2.4
14
90
5
50
18
12
24
45
1.83
32707--32739
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!