Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013196.1 Corchorus olitorius cultivar O-4 contig13229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15602

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2597--2632
19
1.9
18
88
5
54
27
22
8
41
1.82
11452--11543
39
2.4
39
89
7
134
22
18
19
39
1.93
11344--11665
147
2.2
147
85
3
416
22
20
19
37
1.94
12312--12350
20
2.0
20
94
0
69
28
10
5
56
1.54
12651--12684
5
6.8
5
96
0
59
85
0
0
14
0.60
15503--15585
2
41.5
2
85
0
112
43
2
0
54
1.13
15503--15584
32
2.6
32
100
0
164
42
2
0
54
1.13

Tables:   1

The End!